What should my business be classified as for tax purposes?

When starting or restructuring a business, the legal entity you choose defines your legal liability and operational framework. However, it is the federal tax classification that determines the taxation of your business, including how your profits are taxed, what limitations may apply, and what reporting requirements you must meet.

Federal law establishes default tax classifications based on the state-level entity. A state-registered corporation is, by default, taxed as a C corporation. A limited liability company (LLC) with a single owner is treated as a disregarded entity, while an entity that is not a corporation and has multiple owners (e.g., a state-registered partnership or limited liability company) is taxed as a partnership. In many cases, eligible entities can elect to override these defaults and choose a different classification by filing Form 8832: Entity Classification Election or by making an S Corporation election by filing Form 2553: Election by a Small Business Corporation.

Understanding the distinctions between potential tax classifications for your business is crucial for effective tax planning. This article provides a brief overview of the federal tax treatment for the most common business structures.

Sole Proprietorship and Single-Member LLC (SMLLC)

In our article, How do I form a legal entity for my business? , we discuss how forming a separate LLC instead of operating as a sole proprietorship creates a shield of limited liability to protect your personal assets against obligations of the business. However, for federal income tax purposes, there is no difference in the taxation of a business conducted as a sole proprietorship or through a single-member LLC. This is because the default classification of a single-member LLC is a disregarded entity, meaning that the IRS ignores the existence of the LLC, and the profits and losses of the business are treated as earned directly by the individual owner.

The Core Takeaway: For federal tax purposes, the IRS generally ignores the separate legal existence of a SMLLC and treats the individual owner as operating the business. This makes them simple to operate, but offers no immediate tax advantage over a sole proprietorship.

Partnership and Multi-Member LLC (MMLLC)

Any business with two or more owners that is not classified as a corporation is typically treated as a partnership by default.

Understanding Loss Limitations for Pass-Through Entities

A critical factor for owners of partnerships, LLCs, and S Corporations is the ability to deduct business losses on their personal tax return. These losses are subject to four distinct layers of limits, applied sequentially:

  1. Basis Limitation: An owner cannot deduct losses that exceed their adjusted basis in the entity. Basis essentially represents your economic investment—the total of your capital contributions, loans you made to the entity, and your share of the entity’s previously taxed income. Partners in a partnership can generally include their share of the entity’s liabilities (debt) in their basis, which can increase their ability to deduct losses. Losses that exceed an owner’s basis are suspended and can only be deducted in a future year when their basis is restored (e.g., through new contributions or future income).

  2. At-Risk Rules: These rules are designed to prevent taxpayers from deducting losses that exceed the amount they are actually financially at risk of losing. While similar to basis, the at-risk amount generally excludes amounts borrowed for which the owner is not personally liable (such as non-recourse debt, with an exception for qualified non-recourse real estate financing). Losses disallowed by the at-risk rules are carried forward indefinitely.

  3. Passive Activity Loss (PAL) Rules: The passive activity loss rules generally restrict losses from “passive activities” (or business activities in which the owner does not materially participate—i.e., rental activities or businesses where the owner is not involved on a regular, continuous, and substantial basis) from offsetting “non-passive” income (like wages, interest, or income from a materially participating business). Passive losses are suspended and can generally only be used to offset future passive income, or when the entire passive activity is sold in a fully taxable transaction.

  4. Excess Business Loss (EBL) Limitation: This limitation restricts the amount of combined business losses (from all activities) that can be deducted against non-business income (such as investment income or wages) in a given year. If the net business loss exceeds a threshold amount (which is adjusted annually for inflation), the excess loss is disallowed and treated as a net operating loss carryforward to the next tax year.

Electing to be Taxed as a Corporation (Form 8832)

While the default classification for a partnership or LLC is to be treated as a pass-through entity, eligible entities can affirmatively elect to be treated as a C corporation for tax purposes. The election (also referred to as a “check-the-box election”) is made by filing IRS Form 8832, Entity Classification Election.

  • Timing of the Election: Generally, the effective date of the election cannot be more than 75 days prior to the date the election is filed, nor can it take effect later than 12 months after the date filed. This provides flexibility for new or existing entities seeking to change their classification to C corporation status. Note, however, that an entity can only change its tax classification once every five years. For example, if an LLC is formed in Year 1 and is treated as a pass-through entity for Years 1 and 2 but makes a check-the-box election to be treated as a C corporation at the beginning of Year 3, it cannot change back to a pass-through entity until Year 8.

  • Consequence of Election: Choosing C corporation status subjects the entity and its owners to the rules detailed in the section below, including entity-level tax and double taxation on business profits when dividends are received.

C Corporation

The default tax classification of a state-registered corporation is a C corporation, which is treated as an entity entirely separate from its owners for tax purposes.

Rules Governing Net Operating Losses (NOLs)

An NOL occurs when a business’ allowable deductions exceed its gross income for a taxable year. C corporations use NOLs to reduce taxes in profitable years, but recent tax law changes have significantly altered the rules:

  • No Carryback: For most NOLs generated in tax years beginning after December 31, 2020, C corporations are generally prohibited from carrying the loss back to offset income and recover taxes paid in prior years.

  • Indefinite Carryforward: Losses can be carried forward indefinitely to offset taxable income in future years.

  • 80% Limitation: For losses generated in tax years beginning after December 31, 2017, the deduction for NOLs is generally limited to 80% of the corporation’s taxable income (computed without regard to the NOL deduction). This means that even in a highly profitable year, a C corporation must pay income tax on at least 20% of its taxable income, even if it has sufficient NOL carryforwards to fully offset that income.

The C Corporation Advantage: Qualified Small Business Stock (QSBS)

The Qualified Small Business Stock (QSBS) exclusion under Internal Revenue Code Section 1202 is exclusive to C corporations and is one of the most powerful tax incentives for investors and founders.

  • Tax Benefit: Non-corporate shareholders may be able to exclude up to 100% of the gain realized from the sale of QSBS from their taxable income, subject to a limitation (generally the greater of (i) 10 times the adjusted basis of the stock or (ii) for QSBS issued before July 4, 2025, $10 million and for QSBS issued on or after July 4, 2025, $15 million).

  • Key Requirements: To qualify for this exclusion, the stock must meet several strict requirements:

    • Entity Tax Classification: The stock must be issued by a domestic C Corporation. Stock issued by an S Corporation never qualifies.

    • Assets: The corporation’s aggregate gross assets must not have exceeded $50 million at the time the stock was issued for issuances before July 4, 2025 or $75 million at the time the stock was issued for issuances on or after July 4, 2025.

    • Holding Period:

      • For QSBS issued prior to July 4, 2025, the shareholder must hold the stock for more than five years.

      • For QSBS issued on or after July 4, 2025, the amount of gain excluded depends on how long the shareholder held the stock:

      • 3 years: 50% exclusion

      • 4 years: 75% exclusion

      • 5 years: 100% exclusion

    • Active Business: The corporation must meet an active business requirement (at least 80% of its assets must be used in the active conduct of a qualified trade or business, excluding certain service industries like law, accounting, and consulting).

This potential for a substantial tax-free exit is often the primary reason high-growth start-ups choose C corporation status, despite the burden of double taxation on annual earnings.

The Personal Holding Company Tax

Beyond the corporate income tax, certain closely-held C corporations face a significant additional penalty tax known as the Personal Holding Company (PHC) tax. This measure is intended to discourage the use of C corporations as passive investment vehicles to shelter income from high individual tax rates.

A corporation is classified as a PHC if it meets both of the following tests:

  • Stock Ownership Test: More than 50% of the value of the outstanding stock is owned, directly or indirectly, by five or fewer individuals at any time during the last half of the tax year.

  • Income Test: At least 60% of the corporation’s adjusted ordinary gross income comes from passive sources, generally referred to as Personal Holding Company Income (PHCI). PHCI typically includes dividends, interest, rent (subject to certain exceptions), royalties, annuities, and certain income from personal service contracts.

Tax Consequence: If classified as a PHC, the corporation must pay an additional flat penalty tax of 20% on its Undistributed Personal Holding Company Income (UPHCI). This tax is assessed in addition to the regular 21% corporate income tax.

S Corporation

If certain requirements are met, corporations and LLCs can elect to be treated as an S corporation for federal income tax purposes by filing Form 2553. This is a purely tax designation and does not impact the entity’s state law structure.

Self-Employment Tax Benefit

For sole proprietorships and active partners in a partnership, the entire net profit of the business is subject to the 15.3% self-employment tax. For S corporations, however, only the wages paid to a shareholder/member-employee are subject to FICA taxes (i.e., the employee and employer portions of Social Security and Medicare taxes). The remaining ordinary business income allocated to the shareholder/member via their Schedule K-1 is not considered self-employment income and thus avoids the 15.3% self-employment tax. This split between W-2 salary (subject to payroll tax) and allocations of income (made free of payroll tax) is the most significant tax advantage for S corporations.

S Corporation Requirements

To qualify for S corporation status, the entity must satisfy a number of requirements, including:

  • Domestic Status: Be a domestic corporation or domestic LLC.

  • Certain Activities Not Eligible: Certain financial institutions, insurance companies, and domestic international sales corporations cannot make an S corporation election.

  • Shareholder Limit: Have no more than 100 shareholders.

  • Eligible Shareholders: Shareholders must generally be U.S. citizens, U.S. residents, or certain trusts or estates. Partnerships, C corporations, and non-residents typically cannot be shareholders.

  • One Class of Stock: The entity must have only one class of stock (but differences in voting rights are generally permitted).

These requirements must be met at all times. If an S corporation fails to meet a requirement, the S corporation election is deemed to have been terminated, and the S corporation is automatically treated as a C corporation from the date the corporation failed to qualify as an S corporation.

Additional Tax Considerations for S Corporations

While payroll tax savings are the main incentive for electing S corporation status, there are several other key tax and administrative hurdles exist that owners must be prepared to manage:

  • Rigid Allocation of Income/Loss: Because S corporations can only have one class of stock, all income, losses, and deductions must be allocated to shareholders strictly based on their percentage of stock ownership. This offers far less flexibility compared to a multi-member LLC taxed as a partnership, which can use special allocation provisions in its operating agreement to assign profits or losses disproportionately.

  • Built-in Gains Tax Trap: If an entity converts from a C corporation to an S corporation, it is subject to the built-in gains tax for a five-year recognition period. This ensures that any appreciation in the value of the C corporation’s assets that existed on the date of conversion does not escape corporate-level tax. If these appreciated assets are sold within the five-year period, the S corporation must pay tax on the recognized gain at the highest corporate tax rate. This is a key reason why timing is critical when converting from a C corporation to an S corporation.

 Making the S Corporation Election

Eligible entities can affirmatively elect to be treated as a S corporation for tax purposes by filing Form 2553, Election by a Small Business Corporation. All shareholders (and any spouses of shareholders residing in community property states) must sign the form to consent to the election.

  • Timing of the Election: The timing is critical to ensure the election is effective for the desired tax year:

    • The form must generally be filed no more than 2 months and 15 days after the beginning of the tax year the election is to take effect, or

    • If the entity is already in existence and is filing as a partnership or C corporation, the form can be filed any time during the tax year immediately preceding the tax year the election is to take effect. 

The Qualified Business Income Deduction for Owners of Pass-Through Entities

The Qualified Business Income (QBI) deduction, or Section 199A deduction, is a significant tax provision that allows eligible individuals, estates, and trusts to deduct up to 20% of their QBI from their taxable income.

Income from ownership of a C corporation is not eligible for the QBI deduction, as the provision was designed to provide tax parity between corporate income (taxed at the reduced corporate rate) and pass-through income (taxed at individual rates).

QBI generally includes the net amount of qualified items of income, gain, deduction, and loss from any qualified trade or business, including income from partnerships, S corporations, sole proprietorships, and certain trusts. However, many items, including investment items (like capital gains or losses), salary or wages (including amounts received as reasonable compensation from an S corporation or as guaranteed payments for services from a partnership), and certain dividends do not constitute QBI.

Complex Limitations

While the potential for a 20% deduction is attractive, the actual calculation is often complex and subject to several limitations based on the taxpayer’s total taxable income:

  • Specified Service Trade or Business (SSTB): For high-income taxpayers, income derived from an SSTB—which includes fields like health, law, accounting, consulting, and financial services—may be subject to phase-out or complete exclusion from the QBI deduction.

  • W-2 Wage and Property Limitation: For high-income taxpayers who are not in an SSTB, the deduction is limited to the greater of:

    • 50% of the W-2 wages paid by the business, or

    • 25% of the W-2 wages paid, plus 2.5% of the unadjusted basis immediately after acquisition (UBIA) of qualified property (e.g., depreciable tangible property).

If a business owner’s taxable income is below certain thresholds (which are adjusted annually for inflation), they are generally exempt from both the SSTB exclusion and the W-2/property limitations.

Additional Tax Considerations for New Business Owners

While the state-law structure and available tax elections generally dictate an entity’s federal income tax classification, a new business owner must be aware of several other critical tax obligations and considerations:

Estimated Taxes

Any taxpayer who expects to owe at least $1,000 in tax (or $500 in the case of C corporations) when filing their annual federal tax return is generally required to pay taxes in advance through quarterly estimated payments. For pass-through entities, income tax and self-employment tax are not automatically withheld from business profits, so the responsibility of calculating and making estimated payments falls on the individual owners. Penalties may be imposed on taxpayers who fail to make estimated tax payments or who fail to pay a sufficient amount of estimated taxes.

Estimated payments are calculated and remitted on Form 1040-ES for individuals and Form 1120-W for C corporations.

State and Local Tax Non-Conformity

Some state and local tax laws may not follow the federal tax classification of an entity, creating potential complexity for a business’ tax compliance.

  • Entity-level Taxes for S Corporations and LLCs: Many states do not recognize the S corporation designation for state income tax purposes, requiring the entity to pay a corporate-level income tax or a gross receipts tax. Similarly, many states and localities impose annual franchise taxes or capital fees on LLCs, regardless of federal tax treatment, often based on the entity’s gross receipts or net worth.

  • Separate Filings: Business owners often must file separate state-level entity returns and pay additional fees even if the entity is disregarded or a pass-through entity for federal purposes.

 

Choosing an appropriate tax structure is one of the most important decisions a new or growing business will make. An entity’s tax classification profoundly impacts its administrative complexity, owners’ liability, and, most significantly, the overall tax burden. Therefore, understanding these classification rules is not just a compliance formality, it is a foundational step in strategic business planning that will dictate a company's financial future.

Ready to start? Click here to schedule a consultation with Kalaria Law today and ensure the tax classification for your business optimizes your tax planning goals.

Disclaimer: This article is for general informational purposes only and does not constitute formal legal advice.

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